Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SLJ86051.1 | SLK00401.1 | SAMN06295987_10147 | SAMN06295987_103281 | Outer membrane receptor proteins, mostly Fe transport. | Iron complex outermembrane recepter protein. | 0.634 |
SLJ99021.1 | SLK00401.1 | SAMN06295987_10328 | SAMN06295987_103281 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.724 |
SLJ99021.1 | SLK00420.1 | SAMN06295987_10328 | SAMN06295987_103286 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.457 |
SLJ99021.1 | SLK11809.1 | SAMN06295987_10328 | SAMN06295987_1164 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.457 |
SLJ99021.1 | SLK12392.1 | SAMN06295987_10328 | SAMN06295987_1195 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.432 |
SLJ99252.1 | SLK00395.1 | SAMN06295987_10366 | SAMN06295987_103280 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.454 |
SLJ99252.1 | SLK00401.1 | SAMN06295987_10366 | SAMN06295987_103281 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.644 |
SLJ99252.1 | SLK11809.1 | SAMN06295987_10366 | SAMN06295987_1164 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.406 |
SLK00395.1 | SLJ99252.1 | SAMN06295987_103280 | SAMN06295987_10366 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.454 |
SLK00395.1 | SLK00401.1 | SAMN06295987_103280 | SAMN06295987_103281 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.751 |
SLK00401.1 | SLJ86051.1 | SAMN06295987_103281 | SAMN06295987_10147 | Iron complex outermembrane recepter protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.634 |
SLK00401.1 | SLJ99021.1 | SAMN06295987_103281 | SAMN06295987_10328 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.724 |
SLK00401.1 | SLJ99252.1 | SAMN06295987_103281 | SAMN06295987_10366 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.644 |
SLK00401.1 | SLK00395.1 | SAMN06295987_103281 | SAMN06295987_103280 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.751 |
SLK00401.1 | SLK00420.1 | SAMN06295987_103281 | SAMN06295987_103286 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.664 |
SLK00401.1 | SLK00642.1 | SAMN06295987_103281 | SAMN06295987_103322 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.655 |
SLK00401.1 | SLK03282.1 | SAMN06295987_103281 | SAMN06295987_104212 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.640 |
SLK00401.1 | SLK05971.1 | SAMN06295987_103281 | SAMN06295987_105278 | Iron complex outermembrane recepter protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.652 |
SLK00401.1 | SLK11809.1 | SAMN06295987_103281 | SAMN06295987_1164 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.686 |
SLK00401.1 | SLK12392.1 | SAMN06295987_103281 | SAMN06295987_1195 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.615 |
page 1 of 3