Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SLJ93189.1 | SLJ99064.1 | SAMN06295987_10279 | SAMN06295987_10333 | PTS system, nitrogen regulatory IIA component. | 2-dehydro-3-deoxygluconokinase. | 0.464 |
SLJ93189.1 | SLJ99096.1 | SAMN06295987_10279 | SAMN06295987_10337 | PTS system, nitrogen regulatory IIA component. | Fructuronate reductase. | 0.666 |
SLJ93189.1 | SLK00044.1 | SAMN06295987_10279 | SAMN06295987_103215 | PTS system, nitrogen regulatory IIA component. | PTS system, fructose-specific IIC component. | 0.990 |
SLJ93189.1 | SLK00052.1 | SAMN06295987_10279 | SAMN06295987_103217 | PTS system, nitrogen regulatory IIA component. | Phosphocarrier protein HPr. | 0.995 |
SLJ93189.1 | SLK05579.1 | SAMN06295987_10279 | SAMN06295987_105196 | PTS system, nitrogen regulatory IIA component. | Mannose-1-phosphate guanylyltransferase (GDP). | 0.433 |
SLJ93189.1 | SLK12003.1 | SAMN06295987_10279 | SAMN06295987_11710 | PTS system, nitrogen regulatory IIA component. | Fructokinase. | 0.544 |
SLJ99064.1 | SLJ93189.1 | SAMN06295987_10333 | SAMN06295987_10279 | 2-dehydro-3-deoxygluconokinase. | PTS system, nitrogen regulatory IIA component. | 0.464 |
SLJ99064.1 | SLJ99068.1 | SAMN06295987_10333 | SAMN06295987_10334 | 2-dehydro-3-deoxygluconokinase. | D-mannonate dehydratase. | 0.961 |
SLJ99064.1 | SLJ99096.1 | SAMN06295987_10333 | SAMN06295987_10337 | 2-dehydro-3-deoxygluconokinase. | Fructuronate reductase. | 0.864 |
SLJ99064.1 | SLK00044.1 | SAMN06295987_10333 | SAMN06295987_103215 | 2-dehydro-3-deoxygluconokinase. | PTS system, fructose-specific IIC component. | 0.836 |
SLJ99064.1 | SLK00052.1 | SAMN06295987_10333 | SAMN06295987_103217 | 2-dehydro-3-deoxygluconokinase. | Phosphocarrier protein HPr. | 0.587 |
SLJ99064.1 | SLK05579.1 | SAMN06295987_10333 | SAMN06295987_105196 | 2-dehydro-3-deoxygluconokinase. | Mannose-1-phosphate guanylyltransferase (GDP). | 0.856 |
SLJ99064.1 | SLK10701.1 | SAMN06295987_10333 | SAMN06295987_11243 | 2-dehydro-3-deoxygluconokinase. | Hypothetical protein. | 0.797 |
SLJ99064.1 | uxaC | SAMN06295987_10333 | SAMN06295987_10336 | 2-dehydro-3-deoxygluconokinase. | Glucuronate isomerase. | 0.734 |
SLJ99064.1 | xylB | SAMN06295987_10333 | SAMN06295987_101451 | 2-dehydro-3-deoxygluconokinase. | Xylulokinase. | 0.675 |
SLJ99068.1 | SLJ99064.1 | SAMN06295987_10334 | SAMN06295987_10333 | D-mannonate dehydratase. | 2-dehydro-3-deoxygluconokinase. | 0.961 |
SLJ99068.1 | SLJ99096.1 | SAMN06295987_10334 | SAMN06295987_10337 | D-mannonate dehydratase. | Fructuronate reductase. | 0.955 |
SLJ99068.1 | uxaC | SAMN06295987_10334 | SAMN06295987_10336 | D-mannonate dehydratase. | Glucuronate isomerase. | 0.843 |
SLJ99096.1 | SLJ93189.1 | SAMN06295987_10337 | SAMN06295987_10279 | Fructuronate reductase. | PTS system, nitrogen regulatory IIA component. | 0.666 |
SLJ99096.1 | SLJ99064.1 | SAMN06295987_10337 | SAMN06295987_10333 | Fructuronate reductase. | 2-dehydro-3-deoxygluconokinase. | 0.864 |
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