STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLK01021.1Two-component system, chemotaxis family, CheB/CheR fusion protein. (1140 aa)    
Predicted Functional Partners:
SLJ91009.1
Multi-sensor hybrid histidine kinase.
 
 0.999
SLJ86304.1
PAS domain S-box-containing protein.
 
 0.999
SLJ86382.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SLJ86944.1
Hypothetical protein.
  
 0.999
SLJ88344.1
PAS domain S-box-containing protein.
 
 0.999
SLK04067.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SLK07385.1
Signal transduction histidine kinase.
 0.999
SLJ86390.1
Purine-binding chemotaxis protein CheW.
 
 0.998
SLJ96399.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 0.998
SLK01046.1
Signal transduction histidine kinase.
 0.998
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.