STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLK03612.1Methyl-accepting chemotaxis protein. (595 aa)    
Predicted Functional Partners:
SLK04067.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.996
SLJ86382.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.989
SLJ86304.1
PAS domain S-box-containing protein.
  
 0.973
SLK01021.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.969
SLJ86390.1
Purine-binding chemotaxis protein CheW.
 
 0.968
SLK04060.1
Purine-binding chemotaxis protein CheW.
 
 0.957
SLJ86944.1
Hypothetical protein.
  
 0.911
cheB-2
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.882
SLK04047.1
Chemotaxis protein methyltransferase CheR.
 
 0.878
SLJ86383.1
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.877
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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