Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SLJ90874.1 | SLJ93777.1 | SAMN06295987_1011277 | SAMN06295987_102184 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADH) large subunit. | 0.961 |
SLJ90874.1 | SLK07501.1 | SAMN06295987_1011277 | SAMN06295987_106268 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Prophage CP4-57 regulatory protein (AlpA). | 0.653 |
SLJ93777.1 | SLJ90874.1 | SAMN06295987_102184 | SAMN06295987_1011277 | Glutamate synthase (NADH) large subunit. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.961 |
SLJ93777.1 | SLK07501.1 | SAMN06295987_102184 | SAMN06295987_106268 | Glutamate synthase (NADH) large subunit. | Prophage CP4-57 regulatory protein (AlpA). | 0.782 |
SLK07498.1 | SLK07499.1 | SAMN06295987_106266 | SAMN06295987_106267 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.773 |
SLK07498.1 | SLK07501.1 | SAMN06295987_106266 | SAMN06295987_106268 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Prophage CP4-57 regulatory protein (AlpA). | 0.536 |
SLK07498.1 | SLK07505.1 | SAMN06295987_106266 | SAMN06295987_106269 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | RepB DNA-primase. | 0.536 |
SLK07498.1 | SLK07514.1 | SAMN06295987_106266 | SAMN06295987_106270 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | AAA domain-containing protein. | 0.600 |
SLK07499.1 | SLK07498.1 | SAMN06295987_106267 | SAMN06295987_106266 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.773 |
SLK07499.1 | SLK07501.1 | SAMN06295987_106267 | SAMN06295987_106268 | Hypothetical protein. | Prophage CP4-57 regulatory protein (AlpA). | 0.536 |
SLK07499.1 | SLK07505.1 | SAMN06295987_106267 | SAMN06295987_106269 | Hypothetical protein. | RepB DNA-primase. | 0.536 |
SLK07499.1 | SLK07514.1 | SAMN06295987_106267 | SAMN06295987_106270 | Hypothetical protein. | AAA domain-containing protein. | 0.536 |
SLK07501.1 | SLJ90874.1 | SAMN06295987_106268 | SAMN06295987_1011277 | Prophage CP4-57 regulatory protein (AlpA). | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.653 |
SLK07501.1 | SLJ93777.1 | SAMN06295987_106268 | SAMN06295987_102184 | Prophage CP4-57 regulatory protein (AlpA). | Glutamate synthase (NADH) large subunit. | 0.782 |
SLK07501.1 | SLK07498.1 | SAMN06295987_106268 | SAMN06295987_106266 | Prophage CP4-57 regulatory protein (AlpA). | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.536 |
SLK07501.1 | SLK07499.1 | SAMN06295987_106268 | SAMN06295987_106267 | Prophage CP4-57 regulatory protein (AlpA). | Hypothetical protein. | 0.536 |
SLK07501.1 | SLK07505.1 | SAMN06295987_106268 | SAMN06295987_106269 | Prophage CP4-57 regulatory protein (AlpA). | RepB DNA-primase. | 0.777 |
SLK07501.1 | SLK07514.1 | SAMN06295987_106268 | SAMN06295987_106270 | Prophage CP4-57 regulatory protein (AlpA). | AAA domain-containing protein. | 0.777 |
SLK07505.1 | SLK07498.1 | SAMN06295987_106269 | SAMN06295987_106266 | RepB DNA-primase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.536 |
SLK07505.1 | SLK07499.1 | SAMN06295987_106269 | SAMN06295987_106267 | RepB DNA-primase. | Hypothetical protein. | 0.536 |
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