STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLK07791.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SLK07793.1
Antirestriction protein ArdC.
 
     0.943
SLK13154.1
Antirestriction protein ArdC.
  
     0.763
SLK07829.1
Antirestriction protein ArdC.
  
     0.758
SLK10239.1
Antirestriction protein ArdC.
  
     0.758
SLK06050.1
Antirestriction protein ArdC.
  
     0.721
SLK08788.1
Antirestriction protein ArdC.
  
     0.715
SLK07622.1
Conjugative relaxase domain-containing protein, TrwC/TraI family.
 
     0.696
SLK09185.1
Conjugative relaxase domain-containing protein, TrwC/TraI family.
 
     0.681
SLK07785.1
Hypothetical protein.
 
     0.659
SLJ91315.1
Protein of unknown function.
 
     0.647
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.