STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLK09645.1P2-like prophage tail protein X. (74 aa)    
Predicted Functional Partners:
SLK09477.1
Hypothetical protein.
  
 
 0.993
SLK09566.1
Phage-related baseplate assembly protein.
  
 
 0.987
SLK09544.1
Phage tail protein, P2 protein I family.
  
 
 0.985
SLK09500.1
Hypothetical protein.
  
   0.984
SLK09506.1
Hypothetical protein.
  
 
 0.984
SLK09496.1
Hypothetical protein.
  
   0.983
SLK09652.1
Phage head completion protein (GPL).
  
    0.977
SLK09680.1
Phage major capsid protein, P2 family.
  
  
 0.942
SLK09582.1
Phage virion morphogenesis (putative tail completion) protein.
  
    0.931
SLK09597.1
P2 phage tail completion protein R (GpR).
  
    0.931
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.