STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH40575.1Signal transduction histidine kinase. (482 aa)    
Predicted Functional Partners:
SDI50845.1
PAS domain S-box-containing protein.
  
 0.980
SDH40551.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.969
SDI04274.1
Signal transduction histidine kinase.
  
 0.957
SDI62895.1
Signal transduction histidine kinase.
 
 0.937
SDH96974.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.926
SDH95148.1
Na+/proline symporter.
 
 
 0.895
SDI16783.1
Two-component system, NarL family, sensor histidine kinase EvgS.
 
 
0.883
SDH43094.1
Two-component system, NarL family, sensor histidine kinase EvgS.
 
 
0.881
SDH67401.1
Two-component system, NarL family, sensor histidine kinase EvgS/two-component system, unclassified family, sensor histidine kinase and response regulator.
 
 
0.880
SDI50825.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.872
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.