STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH48461.1Phosphonate degradation operons associated HDIG domain protein. (193 aa)    
Predicted Functional Partners:
SDH48483.1
Beta-phosphoglucomutase, HAD superfamily.
 
    0.970
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
    0.623
SDH48439.1
Protein of unknown function.
       0.615
SDH39216.1
FAD dependent oxidoreductase TIGR03364.
 
     0.613
SDI46334.1
Phytanoyl-CoA dioxygenase (PhyH).
 
  
  0.552
SDH46104.1
Response regulator receiver domain-containing protein.
   
    0.551
SDH39185.1
iron(III) transport system substrate-binding protein.
 
     0.515
phnW
2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
     0.501
SDH39176.1
iron(III) transport system permease protein.
 
     0.487
SDH48514.1
Phospholipid-binding lipoprotein MlaA.
 
     0.418
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.