Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH60512.1 | SDH64900.1 | SAMN05216272_102133 | SAMN05216272_102331 | Homoserine dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.753 |
SDH60512.1 | SDH68665.1 | SAMN05216272_102133 | SAMN05216272_102528 | Homoserine dehydrogenase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.719 |
SDH60512.1 | SDH80349.1 | SAMN05216272_102133 | SAMN05216272_103189 | Homoserine dehydrogenase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.962 |
SDH60512.1 | SDI08077.1 | SAMN05216272_102133 | SAMN05216272_105341 | Homoserine dehydrogenase. | Biotin-requiring enzyme. | 0.785 |
SDH60512.1 | SDI39747.1 | SAMN05216272_102133 | SAMN05216272_108319 | Homoserine dehydrogenase. | Glutamate synthase (NADPH) large subunit. | 0.860 |
SDH60512.1 | SDI61908.1 | SAMN05216272_102133 | SAMN05216272_11329 | Homoserine dehydrogenase. | Pyruvate carboxylase subunit B. | 0.777 |
SDH64900.1 | SDH60512.1 | SAMN05216272_102331 | SAMN05216272_102133 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Homoserine dehydrogenase. | 0.753 |
SDH64900.1 | SDH68665.1 | SAMN05216272_102331 | SAMN05216272_102528 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.761 |
SDH64900.1 | SDI08077.1 | SAMN05216272_102331 | SAMN05216272_105341 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Biotin-requiring enzyme. | 0.898 |
SDH64900.1 | SDI17343.1 | SAMN05216272_102331 | SAMN05216272_106210 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.725 |
SDH64900.1 | SDI61908.1 | SAMN05216272_102331 | SAMN05216272_11329 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Pyruvate carboxylase subunit B. | 0.918 |
SDH64900.1 | SDI67863.1 | SAMN05216272_102331 | SAMN05216272_11574 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.933 |
SDH68665.1 | SDH60512.1 | SAMN05216272_102528 | SAMN05216272_102133 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Homoserine dehydrogenase. | 0.719 |
SDH68665.1 | SDH64900.1 | SAMN05216272_102528 | SAMN05216272_102331 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.761 |
SDH68665.1 | SDH80349.1 | SAMN05216272_102528 | SAMN05216272_103189 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.680 |
SDH68665.1 | SDI08077.1 | SAMN05216272_102528 | SAMN05216272_105341 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Biotin-requiring enzyme. | 0.683 |
SDH68665.1 | SDI17343.1 | SAMN05216272_102528 | SAMN05216272_106210 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.758 |
SDH68665.1 | SDI39747.1 | SAMN05216272_102528 | SAMN05216272_108319 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH) large subunit. | 0.784 |
SDH68665.1 | SDI50698.1 | SAMN05216272_102528 | SAMN05216272_110154 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.806 |
SDH68665.1 | SDI61908.1 | SAMN05216272_102528 | SAMN05216272_11329 | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyruvate carboxylase subunit B. | 0.695 |
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