STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH59346.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
SDH59323.1
Hypothetical protein.
  
    0.812
SDH59291.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
       0.793
SDH62744.1
Phospholipase/carboxylesterase.
     
 0.729
SDH90611.1
Phospholipase/carboxylesterase.
     
 0.729
SDI37404.1
Rhamnosyltransferase.
  
 
 0.720
SDI37433.1
Glycosyl transferases group 1.
 
 
 
 0.705
SDH66867.1
Protein of unknown function.
 
     0.697
SDI06012.1
Protein of unknown function.
 
     0.696
SDH66882.1
Protein of unknown function.
 
     0.681
SDI37381.1
Glycosyltransferase involved in cell wall bisynthesis.
   
 
 0.669
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.