STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH79289.1Response regulator receiver and ANTAR domain protein. (192 aa)    
Predicted Functional Partners:
SDH79314.1
Nitrate/nitrite transport system substrate-binding protein.
 
  
 0.953
SDH31285.1
ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system.
 
 
 0.908
SDI04228.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.902
SDH79183.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.889
SDI68896.1
Urea transport system substrate-binding protein.
  
 
 0.884
SDH36583.1
Branched-chain amino acid transport system substrate-binding protein.
  
 
 0.882
SDI03437.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.882
SDI71075.1
Branched-chain amino acid transport system substrate-binding protein.
  
 
 0.882
SDI70901.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.882
SDH79159.1
Nitrite reductase (NADH) small subunit.
 
  
 0.846
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.