STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH82501.1Cyclohexanone monooxygenase. (514 aa)    
Predicted Functional Partners:
SDH82480.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.934
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.830
SDH95225.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
 0.810
SDH77935.1
Acetyl esterase/lipase.
 
 0.800
SDH71566.1
Acetyl esterase.
 
 0.784
atpG
ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.770
SDH82520.1
Transcriptional regulator, TetR family.
 
     0.750
SDI73128.1
Acetyl esterase.
 
 0.724
SDI06240.1
Cytochrome P450.
 
 0.701
SDH65105.1
Hypothetical protein.
 
     0.691
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.