STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH83291.1Fatty acid desaturase. (340 aa)    
Predicted Functional Partners:
SDH83163.1
N-acyl homoserine lactone hydrolase.
 
     0.919
SDH83225.1
EamA domain-containing membrane protein RarD.
 
     0.846
SDH71301.1
3-ketosteroid 9alpha-monooxygenase subunit B.
  
 
 0.809
SDI03683.1
Ferredoxin-NADP reductase.
  
 
 0.809
SDI13570.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
 0.809
SDI24802.1
Ferredoxin-NADP reductase.
  
 
 0.809
SDI71265.1
Ferredoxin-NADP reductase.
  
 
 0.809
SDI74343.1
Ferredoxin-NADP reductase.
  
 
 0.809
SDH83243.1
3-oxoacyl-[acyl-carrier protein] reductase.
     
 0.804
SDH83094.1
NitT/TauT family transport system ATP-binding protein.
       0.803
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.