Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH91072.1 | SDH91093.1 | SAMN05216272_104100 | SAMN05216272_104101 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmH. | 0.739 |
SDH91072.1 | SDH91111.1 | SAMN05216272_104100 | SAMN05216272_104102 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase. | 0.738 |
SDH91072.1 | SDH91128.1 | SAMN05216272_104100 | SAMN05216272_104103 | Hypothetical protein. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.738 |
SDH91072.1 | SDH91146.1 | SAMN05216272_104100 | SAMN05216272_104104 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmF. | 0.738 |
SDH91072.1 | SDH91183.1 | SAMN05216272_104100 | SAMN05216272_104106 | Hypothetical protein. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.738 |
SDH91072.1 | SDH91223.1 | SAMN05216272_104100 | SAMN05216272_104108 | Hypothetical protein. | Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.591 |
SDH91072.1 | SDH91258.1 | SAMN05216272_104100 | SAMN05216272_104110 | Hypothetical protein. | Hook-length control protein FliK. | 0.440 |
SDH91072.1 | ccmA | SAMN05216272_104100 | SAMN05216272_104109 | Hypothetical protein. | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.591 |
SDH91072.1 | ccmC | SAMN05216272_104100 | SAMN05216272_104107 | Hypothetical protein. | Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.738 |
SDH91072.1 | ccmE | SAMN05216272_104100 | SAMN05216272_104105 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.738 |
SDH91093.1 | SDH91072.1 | SAMN05216272_104101 | SAMN05216272_104100 | Cytochrome c-type biogenesis protein CcmH. | Hypothetical protein. | 0.739 |
SDH91093.1 | SDH91111.1 | SAMN05216272_104101 | SAMN05216272_104102 | Cytochrome c-type biogenesis protein CcmH. | Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase. | 0.986 |
SDH91093.1 | SDH91128.1 | SAMN05216272_104101 | SAMN05216272_104103 | Cytochrome c-type biogenesis protein CcmH. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.992 |
SDH91093.1 | SDH91146.1 | SAMN05216272_104101 | SAMN05216272_104104 | Cytochrome c-type biogenesis protein CcmH. | Cytochrome c-type biogenesis protein CcmF. | 0.998 |
SDH91093.1 | SDH91183.1 | SAMN05216272_104101 | SAMN05216272_104106 | Cytochrome c-type biogenesis protein CcmH. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.925 |
SDH91093.1 | SDH91223.1 | SAMN05216272_104101 | SAMN05216272_104108 | Cytochrome c-type biogenesis protein CcmH. | Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.931 |
SDH91093.1 | SDH91258.1 | SAMN05216272_104101 | SAMN05216272_104110 | Cytochrome c-type biogenesis protein CcmH. | Hook-length control protein FliK. | 0.468 |
SDH91093.1 | ccmA | SAMN05216272_104101 | SAMN05216272_104109 | Cytochrome c-type biogenesis protein CcmH. | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.915 |
SDH91093.1 | ccmC | SAMN05216272_104101 | SAMN05216272_104107 | Cytochrome c-type biogenesis protein CcmH. | Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.962 |
SDH91093.1 | ccmE | SAMN05216272_104101 | SAMN05216272_104105 | Cytochrome c-type biogenesis protein CcmH. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.965 |
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