STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH91540.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (313 aa)    
Predicted Functional Partners:
SDH91553.1
Acyl-CoA dehydrogenase.
 
  
  0.952
SDH91655.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
 
  0.774
SDH71354.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
  
 
0.718
SDH80979.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
  0.709
SDH81200.1
Anthranilate 1,2-dioxygenase reductase subunit.
  
 
  0.709
SDI25693.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
  0.709
SDI67896.1
NAD(P)H-flavin reductase.
  
 
  0.709
SDH38138.1
cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.700
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 
 0.685
ssuD-2
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 
 0.685
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.