STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI07071.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
SDI07091.1
Phage major capsid protein, HK97 family.
  
 0.993
SDI07057.1
Phage portal protein, HK97 family.
 
   
 0.959
SDI07018.1
Phage terminase, small subunit, putative, P27 family.
 
   
 0.910
SDI07039.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
     0.905
SDI07228.1
Phage tail tape measure protein, lambda family.
 
    0.673
SDI07108.1
HeH/LEM domain-containing protein.
       0.620
SDI07125.1
Phage head-tail adaptor, putative, SPP1 family.
 
   
 0.558
SDI07142.1
Phage protein, HK97 gp10 family.
       0.427
SDI07166.1
Protein of unknown function.
       0.427
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.