STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI16876.1CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. (208 aa)    
Predicted Functional Partners:
SDI16967.1
Phosphatidate cytidylyltransferase.
 
 
 0.993
SDI16914.1
Dual specificity phosphatase, catalytic domain.
 
 0.974
SDI16950.1
Hypothetical protein.
 
 0.951
SDI16888.1
Lysophospholipase, alpha-beta hydrolase superfamily.
 
  
 0.921
SDH61448.1
Cytoskeleton protein RodZ.
  
    0.879
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 0.829
SDI52530.1
Undecaprenyl-diphosphatase.
 
 
 0.829
SDH69878.1
Undecaprenyl-diphosphatase.
  
 
 0.802
SDH70027.1
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
    
 0.774
SDI02376.1
Phosphoserine phosphatase.
  
 
 0.756
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.