Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH85094.1 | SDH92655.1 | SAMN05216272_103429 | SAMN05216272_104200 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system permease protein. | 0.983 |
SDH85094.1 | SDH92700.1 | SAMN05216272_103429 | SAMN05216272_104203 | Sulfonate transport system substrate-binding protein. | FMN reductase. | 0.944 |
SDH85094.1 | SDI25176.1 | SAMN05216272_103429 | SAMN05216272_10789 | Sulfonate transport system substrate-binding protein. | FMN reductase. | 0.909 |
SDH85094.1 | SDI60307.1 | SAMN05216272_103429 | SAMN05216272_112138 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system substrate-binding protein. | 0.702 |
SDH85094.1 | SDI70992.1 | SAMN05216272_103429 | SAMN05216272_11710 | Sulfonate transport system substrate-binding protein. | FMN reductase. | 0.911 |
SDH85094.1 | SDI76581.1 | SAMN05216272_103429 | SAMN05216272_12211 | Sulfonate transport system substrate-binding protein. | Taurine dioxygenase. | 0.622 |
SDH85094.1 | ssuB | SAMN05216272_103429 | SAMN05216272_104199 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.956 |
SDH85094.1 | ssuD-2 | SAMN05216272_103429 | SAMN05216272_10788 | Sulfonate transport system substrate-binding protein. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.918 |
SDH92655.1 | SDH85094.1 | SAMN05216272_104200 | SAMN05216272_103429 | Sulfonate transport system permease protein. | Sulfonate transport system substrate-binding protein. | 0.983 |
SDH92655.1 | SDH92686.1 | SAMN05216272_104200 | SAMN05216272_104202 | Sulfonate transport system permease protein. | Sulfonate transport system substrate-binding protein. | 0.988 |
SDH92655.1 | SDH92700.1 | SAMN05216272_104200 | SAMN05216272_104203 | Sulfonate transport system permease protein. | FMN reductase. | 0.940 |
SDH92655.1 | SDI25176.1 | SAMN05216272_104200 | SAMN05216272_10789 | Sulfonate transport system permease protein. | FMN reductase. | 0.899 |
SDH92655.1 | SDI60307.1 | SAMN05216272_104200 | SAMN05216272_112138 | Sulfonate transport system permease protein. | Sulfonate transport system substrate-binding protein. | 0.984 |
SDH92655.1 | SDI70992.1 | SAMN05216272_104200 | SAMN05216272_11710 | Sulfonate transport system permease protein. | FMN reductase. | 0.901 |
SDH92655.1 | SDI76581.1 | SAMN05216272_104200 | SAMN05216272_12211 | Sulfonate transport system permease protein. | Taurine dioxygenase. | 0.769 |
SDH92655.1 | ssuB | SAMN05216272_104200 | SAMN05216272_104199 | Sulfonate transport system permease protein. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.992 |
SDH92655.1 | ssuD-2 | SAMN05216272_104200 | SAMN05216272_10788 | Sulfonate transport system permease protein. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.912 |
SDH92686.1 | SDH92655.1 | SAMN05216272_104202 | SAMN05216272_104200 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system permease protein. | 0.988 |
SDH92686.1 | SDH92700.1 | SAMN05216272_104202 | SAMN05216272_104203 | Sulfonate transport system substrate-binding protein. | FMN reductase. | 0.969 |
SDH92686.1 | SDI25137.1 | SAMN05216272_104202 | SAMN05216272_10787 | Sulfonate transport system substrate-binding protein. | Acyl-CoA dehydrogenase. | 0.441 |
page 1 of 5