STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI37404.1Rhamnosyltransferase. (332 aa)    
Predicted Functional Partners:
SDI37381.1
Glycosyltransferase involved in cell wall bisynthesis.
 0.996
SDI01705.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
 0.981
SDI01576.1
tRNA A-37 threonylcarbamoyl transferase component Bud32.
  
 0.981
SDH58870.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.974
SDH37144.1
Hypothetical protein.
  
 0.972
SDI17311.1
Hypothetical protein.
  
 0.972
SDI37423.1
UDP-glucose 4-epimerase.
 
 0.972
SDI63995.1
Hypothetical protein.
  
 0.972
SDI55356.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.971
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.970
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.