STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI39540.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
SDI39478.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
      0.785
SDH97203.1
Uncharacterized conserved protein YehS, DUF1456 family.
 
    0.690
SDI39515.1
Methyltransferase domain-containing protein.
  
    0.590
SDH47485.1
Uncharacterized conserved protein.
 
     0.579
rlmF
23S rRNA (adenine1618-N6)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
 
     0.546
SDH60407.1
Uncharacterized conserved protein YaeQ, suppresses RfaH defect.
 
    0.542
SDI44329.1
Protein of unknown function.
 
     0.495
SDI39498.1
Hypothetical protein.
       0.476
SDH62200.1
Hypothetical protein.
 
     0.439
ppnP
Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.434
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.