STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI50011.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SDI50030.1
ATP-binding cassette, subfamily B.
 
 
 0.953
SDI49991.1
Dehydrogenase (flavoprotein).
 
     0.952
SDI60011.1
Hypothetical protein.
   
 0.922
SDI49708.1
Quinohemoprotein amine dehydrogenase, gamma subunit.
 
   
 0.848
SDI49753.1
Quinohemoprotein amine dehydrogenase, alpha subunit.
 
   
 0.846
SDI50056.1
Transcriptional regulator of acetoin/glycerol metabolism.
 
     0.827
SDI49735.1
Uncharacterized protein.
 
     0.796
SDI49686.1
Quinohemoprotein amine dehydrogenase, beta subunit.
 
    0.794
SDH43922.1
Protein of unknown function.
  
 0.793
SDH68970.1
Hypothetical protein.
  
 0.793
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.