STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI54831.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SDI54850.1
Hypothetical protein.
       0.778
SDI54873.1
Hypothetical protein.
       0.778
SDI54811.1
PD-(D/E)XK nuclease superfamily protein.
       0.773
SDI54717.1
Hypothetical protein.
       0.767
SDI54733.1
Hypothetical protein.
       0.767
SDI54754.1
Hypothetical protein.
       0.767
SDI54771.1
Hypothetical protein.
       0.767
SDI54795.1
Hypothetical protein.
       0.767
SDI54891.1
Hypothetical protein.
       0.752
SDI54912.1
AAA domain-containing protein.
       0.752
Your Current Organism:
Pseudomonas panipatensis
NCBI taxonomy Id: 428992
Other names: CCM 7469, MTCC 8990, P. panipatensis, Pseudomonas panipatensis Gupta et al. 2008, Pseudomonas sp. Esp-1, strain Esp-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.