Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI24879.1 | SDI61870.1 | SAMN05216272_10774 | SAMN05216272_11327 | Sulfate permease, SulP family. | Phosphonoacetate hydrolase. | 0.473 |
SDI61870.1 | SDI24879.1 | SAMN05216272_11327 | SAMN05216272_10774 | Phosphonoacetate hydrolase. | Sulfate permease, SulP family. | 0.473 |
SDI61870.1 | SDI61884.1 | SAMN05216272_11327 | SAMN05216272_11328 | Phosphonoacetate hydrolase. | Hypothetical protein. | 0.424 |
SDI61870.1 | rplQ | SAMN05216272_11327 | SAMN05216272_102721 | Phosphonoacetate hydrolase. | LSU ribosomal protein L17P. | 0.501 |
SDI61884.1 | SDI61870.1 | SAMN05216272_11328 | SAMN05216272_11327 | Hypothetical protein. | Phosphonoacetate hydrolase. | 0.424 |
rplQ | SDI61870.1 | SAMN05216272_102721 | SAMN05216272_11327 | LSU ribosomal protein L17P. | Phosphonoacetate hydrolase. | 0.501 |