Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH42789.1 | SDH67723.1 | SAMN05216272_101493 | SAMN05216272_102475 | Glutamate dehydrogenase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.670 |
SDH42789.1 | SDH81400.1 | SAMN05216272_101493 | SAMN05216272_103237 | Glutamate dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.714 |
SDH42789.1 | SDI50698.1 | SAMN05216272_101493 | SAMN05216272_110154 | Glutamate dehydrogenase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.823 |
SDH42789.1 | SDI65275.1 | SAMN05216272_101493 | SAMN05216272_11466 | Glutamate dehydrogenase. | Sensor histidine kinase inhibitor, KipI family. | 0.637 |
SDH42789.1 | SDI65279.1 | SAMN05216272_101493 | SAMN05216272_11467 | Glutamate dehydrogenase. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.637 |
SDH42789.1 | pxpA | SAMN05216272_101493 | SAMN05216272_11465 | Glutamate dehydrogenase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.638 |
SDH47431.1 | SDH67723.1 | SAMN05216272_101708 | SAMN05216272_102475 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.657 |
SDH47431.1 | SDH81400.1 | SAMN05216272_101708 | SAMN05216272_103237 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Citrate synthase; Belongs to the citrate synthase family. | 0.657 |
SDH47431.1 | SDI06018.1 | SAMN05216272_101708 | SAMN05216272_105232 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Carbon starvation protein. | 0.877 |
SDH47431.1 | SDI50698.1 | SAMN05216272_101708 | SAMN05216272_110154 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.970 |
SDH47431.1 | pxpA | SAMN05216272_101708 | SAMN05216272_11465 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.716 |
SDH61916.1 | pxpA | SAMN05216272_102199 | SAMN05216272_11465 | Hippurate hydrolase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.712 |
SDH62101.1 | SDI50698.1 | SAMN05216272_102208 | SAMN05216272_110154 | N-methylhydantoinase A. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.794 |
SDH62101.1 | SDI65275.1 | SAMN05216272_102208 | SAMN05216272_11466 | N-methylhydantoinase A. | Sensor histidine kinase inhibitor, KipI family. | 0.685 |
SDH62101.1 | SDI65279.1 | SAMN05216272_102208 | SAMN05216272_11467 | N-methylhydantoinase A. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.676 |
SDH62101.1 | pxpA | SAMN05216272_102208 | SAMN05216272_11465 | N-methylhydantoinase A. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.678 |
SDH67723.1 | SDH42789.1 | SAMN05216272_102475 | SAMN05216272_101493 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | Glutamate dehydrogenase. | 0.670 |
SDH67723.1 | SDH47431.1 | SAMN05216272_102475 | SAMN05216272_101708 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.657 |
SDH67723.1 | SDI50698.1 | SAMN05216272_102475 | SAMN05216272_110154 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.743 |
SDH67723.1 | SDI65275.1 | SAMN05216272_102475 | SAMN05216272_11466 | 2-methylcitrate synthase; Belongs to the citrate synthase family. | Sensor histidine kinase inhibitor, KipI family. | 0.424 |
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