STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC40283.1Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (208 aa)    
Predicted Functional Partners:
SKC40255.1
Predicted exporter.
 
    0.960
SKC40363.1
AMP-binding enzyme.
 
   
 0.957
SKC40334.1
Predicted acyltransferase, LPLAT superfamily.
 
    0.956
SKC40384.1
Uncharacterized membrane protein.
 
   
 0.954
SKC40241.1
Dehydrogenase (flavoprotein).
 
   
 0.952
SKC40214.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
     0.951
SKC40307.1
acyl-CoA thioester hydrolase.
 
    0.951
SKC40356.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.951
SKC40206.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.950
SKC40235.1
Protein of unknown function.
 
     0.947
Your Current Organism:
Pseudoxanthomonas indica
NCBI taxonomy Id: 428993
Other names: CCM 7430, MTCC 8596, P. indica, Pseudoxanthomonas indica Kumari et al. 2011, Pseudoxanthomonas sp. ES-4, Pseudoxanthomonas sp. P15, strain P15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.