Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC40743.1 | SKC48365.1 | SAMN06296058_0111 | SAMN06296058_0653 | ABC-2 type transport system permease protein. | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.657 |
SKC40743.1 | SKC67232.1 | SAMN06296058_0111 | SAMN06296058_2030 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.661 |
SKC40743.1 | SKC76932.1 | SAMN06296058_0111 | SAMN06296058_2723 | ABC-2 type transport system permease protein. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.415 |
SKC48365.1 | SKC40743.1 | SAMN06296058_0653 | SAMN06296058_0111 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | ABC-2 type transport system permease protein. | 0.657 |
SKC48365.1 | SKC65919.1 | SAMN06296058_0653 | SAMN06296058_1905 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (NADPH) large subunit. | 0.636 |
SKC48365.1 | SKC67232.1 | SAMN06296058_0653 | SAMN06296058_2030 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.644 |
SKC48365.1 | SKC67300.1 | SAMN06296058_0653 | SAMN06296058_2042 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.657 |
SKC48365.1 | SKC76932.1 | SAMN06296058_0653 | SAMN06296058_2723 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.812 |
SKC48365.1 | SKC77300.1 | SAMN06296058_0653 | SAMN06296058_2777 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.657 |
SKC48365.1 | SKC80044.1 | SAMN06296058_0653 | SAMN06296058_3191 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-acetylornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.900 |
SKC48365.1 | SKC80050.1 | SAMN06296058_0653 | SAMN06296058_3192 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate synthase. | 0.884 |
SKC48365.1 | argC | SAMN06296058_0653 | SAMN06296058_3196 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.895 |
SKC48365.1 | argH | SAMN06296058_0653 | SAMN06296058_3197 | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate lyase. | 0.851 |
SKC65919.1 | SKC48365.1 | SAMN06296058_1905 | SAMN06296058_0653 | Glutamate synthase (NADPH) large subunit. | L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.636 |
SKC65919.1 | SKC67300.1 | SAMN06296058_1905 | SAMN06296058_2042 | Glutamate synthase (NADPH) large subunit. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.930 |
SKC65919.1 | SKC76932.1 | SAMN06296058_1905 | SAMN06296058_2723 | Glutamate synthase (NADPH) large subunit. | Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.773 |
SKC65919.1 | SKC77300.1 | SAMN06296058_1905 | SAMN06296058_2777 | Glutamate synthase (NADPH) large subunit. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.930 |
SKC65919.1 | SKC80044.1 | SAMN06296058_1905 | SAMN06296058_3191 | Glutamate synthase (NADPH) large subunit. | N-acetylornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.656 |
SKC65919.1 | SKC80050.1 | SAMN06296058_1905 | SAMN06296058_3192 | Glutamate synthase (NADPH) large subunit. | Argininosuccinate synthase. | 0.955 |
SKC65919.1 | argC | SAMN06296058_1905 | SAMN06296058_3196 | Glutamate synthase (NADPH) large subunit. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.610 |
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