STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC57512.1Protein of unknown function. (141 aa)    
Predicted Functional Partners:
SKC57536.1
Hypothetical protein.
 
     0.745
SKC57498.1
Protein of unknown function.
 
  
 
0.707
SKC57524.1
Hypothetical protein.
       0.686
SKC57543.1
Chromosome partitioning protein, ParB family.
       0.686
SKC57552.1
ParB/RepB/Spo0J family partition protein; Belongs to the ParB family.
       0.686
SKC57618.1
Hypothetical protein.
       0.686
SKC80955.1
Chorismate mutase.
  
  
  0.663
SKC57491.1
Protein of unknown function.
 
    
0.604
SKC57484.1
Hypothetical protein.
       0.544
SKC57628.1
Pyocin activator protein PrtN.
       0.539
Your Current Organism:
Pseudoxanthomonas indica
NCBI taxonomy Id: 428993
Other names: CCM 7430, MTCC 8596, P. indica, Pseudoxanthomonas indica Kumari et al. 2011, Pseudoxanthomonas sp. ES-4, Pseudoxanthomonas sp. P15, strain P15
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.