Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC65552.1 | SKC65555.1 | SAMN06296058_1889 | SAMN06296058_1890 | Peroxiredoxin. | Cytochrome c biogenesis protein CcdA. | 0.984 |
SKC65552.1 | SKC65561.1 | SAMN06296058_1889 | SAMN06296058_1891 | Peroxiredoxin. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.817 |
SKC65552.1 | SKC65566.1 | SAMN06296058_1889 | SAMN06296058_1892 | Peroxiredoxin. | Two component transcriptional regulator, winged helix family. | 0.477 |
SKC65552.1 | SKC65582.1 | SAMN06296058_1889 | SAMN06296058_1893 | Peroxiredoxin. | Signal transduction histidine kinase. | 0.479 |
SKC65552.1 | SKC74832.1 | SAMN06296058_1889 | SAMN06296058_2444 | Peroxiredoxin. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.455 |
SKC65555.1 | SKC65552.1 | SAMN06296058_1890 | SAMN06296058_1889 | Cytochrome c biogenesis protein CcdA. | Peroxiredoxin. | 0.984 |
SKC65555.1 | SKC65561.1 | SAMN06296058_1890 | SAMN06296058_1891 | Cytochrome c biogenesis protein CcdA. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.773 |
SKC65555.1 | SKC65566.1 | SAMN06296058_1890 | SAMN06296058_1892 | Cytochrome c biogenesis protein CcdA. | Two component transcriptional regulator, winged helix family. | 0.501 |
SKC65555.1 | SKC65582.1 | SAMN06296058_1890 | SAMN06296058_1893 | Cytochrome c biogenesis protein CcdA. | Signal transduction histidine kinase. | 0.501 |
SKC65561.1 | SKC65552.1 | SAMN06296058_1891 | SAMN06296058_1889 | Pimeloyl-ACP methyl ester carboxylesterase. | Peroxiredoxin. | 0.817 |
SKC65561.1 | SKC65555.1 | SAMN06296058_1891 | SAMN06296058_1890 | Pimeloyl-ACP methyl ester carboxylesterase. | Cytochrome c biogenesis protein CcdA. | 0.773 |
SKC65561.1 | SKC65566.1 | SAMN06296058_1891 | SAMN06296058_1892 | Pimeloyl-ACP methyl ester carboxylesterase. | Two component transcriptional regulator, winged helix family. | 0.608 |
SKC65561.1 | SKC65582.1 | SAMN06296058_1891 | SAMN06296058_1893 | Pimeloyl-ACP methyl ester carboxylesterase. | Signal transduction histidine kinase. | 0.683 |
SKC65566.1 | SKC65552.1 | SAMN06296058_1892 | SAMN06296058_1889 | Two component transcriptional regulator, winged helix family. | Peroxiredoxin. | 0.477 |
SKC65566.1 | SKC65555.1 | SAMN06296058_1892 | SAMN06296058_1890 | Two component transcriptional regulator, winged helix family. | Cytochrome c biogenesis protein CcdA. | 0.501 |
SKC65566.1 | SKC65561.1 | SAMN06296058_1892 | SAMN06296058_1891 | Two component transcriptional regulator, winged helix family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.608 |
SKC65566.1 | SKC65582.1 | SAMN06296058_1892 | SAMN06296058_1893 | Two component transcriptional regulator, winged helix family. | Signal transduction histidine kinase. | 0.988 |
SKC65582.1 | SKC65552.1 | SAMN06296058_1893 | SAMN06296058_1889 | Signal transduction histidine kinase. | Peroxiredoxin. | 0.479 |
SKC65582.1 | SKC65555.1 | SAMN06296058_1893 | SAMN06296058_1890 | Signal transduction histidine kinase. | Cytochrome c biogenesis protein CcdA. | 0.501 |
SKC65582.1 | SKC65561.1 | SAMN06296058_1893 | SAMN06296058_1891 | Signal transduction histidine kinase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.683 |
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