STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC73725.1Isoquinoline 1-oxidoreductase, alpha subunit. (151 aa)    
Predicted Functional Partners:
SKC73718.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.998
SKC82108.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.997
SKC82112.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 0.967
SKC73730.1
Xanthine dehydrogenase accessory factor.
 
 
 0.943
SKC73738.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.927
SKC73711.1
Hypothetical protein.
 
     0.685
SKC79704.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 
 0.564
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
 
 0.564
SKC76825.1
Hypothetical protein.
  
 
 0.541
SKC82117.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
  
  
 
0.474
Your Current Organism:
Pseudoxanthomonas indica
NCBI taxonomy Id: 428993
Other names: CCM 7430, MTCC 8596, P. indica, Pseudoxanthomonas indica Kumari et al. 2011, Pseudoxanthomonas sp. ES-4, Pseudoxanthomonas sp. P15, strain P15
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