STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC80378.1Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (366 aa)    
Predicted Functional Partners:
SKC65919.1
Glutamate synthase (NADPH) large subunit.
  
 0.999
SKC43021.1
2-oxoisovalerate dehydrogenase E1 component.
 
 
 0.993
SKC41916.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.933
SKC52808.1
Branched chain amino acid aminotransferase apoenzyme.
  
 
 0.925
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
   
 0.917
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
   
 
 0.915
SKC67978.1
L-aspartate aminotransferase apoenzyme.
  
 
 0.913
SKC66079.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.912
SKC58939.1
Dihydrolipoamide dehydrogenase.
  
 
 0.908
SKC64532.1
Isocitrate dehydrogenase (NADP).
   
 0.886
Your Current Organism:
Pseudoxanthomonas indica
NCBI taxonomy Id: 428993
Other names: CCM 7430, MTCC 8596, P. indica, Pseudoxanthomonas indica Kumari et al. 2011, Pseudoxanthomonas sp. ES-4, Pseudoxanthomonas sp. P15, strain P15
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.