STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC81736.1Two-component system, response regulator RpfG. (367 aa)    
Predicted Functional Partners:
SKC81741.1
Two-component system, sensor histidine kinase RpfC.
 0.996
SKC51878.1
PAS domain S-box-containing protein; Manually curated.
 0.985
SKC76922.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.984
SKC76917.1
Response regulator receiver domain-containing protein.
 
 0.982
SKC73371.1
Hpt sensor hybrid histidine kinase.
 0.972
SKC77610.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.965
SKC73884.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.964
SKC79860.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.962
SKC60943.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.960
SKC74061.1
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein.
    
 0.958
Your Current Organism:
Pseudoxanthomonas indica
NCBI taxonomy Id: 428993
Other names: CCM 7430, MTCC 8596, P. indica, Pseudoxanthomonas indica Kumari et al. 2011, Pseudoxanthomonas sp. ES-4, Pseudoxanthomonas sp. P15, strain P15
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