Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Adeg_0100TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_1664 EmrB/QacA family drug resistance transporter. (524 aa)    
Predicted Functional Partners:
Adeg_0099
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dze:Dd1591_3361 secretion protein HlyD family protein.
 
 
 0.953
Adeg_0101
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
     
 0.774
Adeg_0102
TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase; KEGG: scl:sce2259 hypothetical protein.
       0.773
Adeg_0097
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bxe:Bxe_A2814 MarR family transcriptional regulator.
  
  
 0.726
Adeg_0098
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dat:HRM2_47450 secretion protein, HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.707
Adeg_1795
KEGG: mxa:MXAN_2542 putative multidrug resistance protein.
  
   
 0.581
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
  
  
 0.475
Adeg_1602
PFAM: major facilitator superfamily MFS_1; KEGG: dvm:DvMF_0592 major facilitator superfamily MFS_1.
  
   
 0.419
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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