Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeg_0331PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dps:DP0684 NADH dehydrogenase subunit E. (158 aa)    
Predicted Functional Partners:
Adeg_0157
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sat:SYN_01648 NADH:ubiquinone oxidoreductase, NADH-binding subunit.
 0.999
Adeg_0332
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_16600 NuoF.
 0.997
Adeg_0383
PFAM: glutamate synthase alpha subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1723 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.980
Adeg_1784
PFAM: methyl-viologen-reducing hydrogenase delta subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.946
Adeg_1781
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: sfu:Sfum_0844 hydrogenases, Fe-only.
 
 0.942
Adeg_1783
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: sfu:Sfum_0844 hydrogenases, Fe-only.
 
 0.942
Adeg_0552
Hypothetical protein; KEGG: dvl:Dvul_2504 ech hydrogenase, subunit EchD, putative.
  
 0.918
Adeg_0158
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: pca:Pcar_0833 NADH:ubiquinone oxidoreductase 24 kD subunit.
  
  
 
0.906
Adeg_0549
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone).
  
 
 0.898
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.812
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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