STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_0551PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dma:DMR_02750 Ech hydrogenase subunit EchC. (143 aa)    
Predicted Functional Partners:
Adeg_0553
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dma:DMR_02770 Ech hydrogenase subunit EchE.
 
 0.999
Adeg_0550
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dma:DMR_02740 Ech hydrogenase subunit EchB.
 
 
 0.995
Adeg_0554
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dds:Ddes_1668 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.970
Adeg_0549
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone).
 
  
 0.950
Adeg_0552
Hypothetical protein; KEGG: dvl:Dvul_2504 ech hydrogenase, subunit EchD, putative.
 
  
 0.942
Adeg_1251
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dds:Ddes_1668 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.915
Adeg_0383
PFAM: glutamate synthase alpha subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1723 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.777
Adeg_0384
PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1724 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
  
 
 0.657
Adeg_1386
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: glo:Glov_2310 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.654
Adeg_0633
PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
    
   0.572
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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