Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeg_0652PFAM: CoA-binding domain protein; KEGG: gme:Gmet_1655 CoA-binding protein. (131 aa)    
Predicted Functional Partners:
Adeg_0653
Transcriptional activator ligand binding domain protein; PFAM: transcription activator effector binding.
       0.773
Adeg_1536
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sat:SYN_02524 ferric uptake regulator family protein; Belongs to the Fur family.
  
    0.644
Adeg_1216
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nis:NIS_1078 ferric uptake regulator; Belongs to the Fur family.
  
    0.558
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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