STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_0807Hypothetical protein. (159 aa)    
Predicted Functional Partners:
Adeg_0805
Hypothetical protein.
       0.788
Adeg_0808
Hypothetical protein.
       0.788
Adeg_0806
TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: mxa:MXAN_7279 CRISPR-associated RAMP Cmr4 family protein family protein.
       0.785
Adeg_0804
PFAM: protein of unknown function DUF324.
       0.773
Adeg_0803
TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family.
       0.561
Adeg_0802
KEGG: dar:Daro_1624 hypothetical protein.
       0.536
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.