STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_1069TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: hpb:HELPY_1529 transposase, OrfB, ISHp609. (410 aa)    
Predicted Functional Partners:
Adeg_0500
PFAM: DNA polymerase beta domain protein region; KEGG: ara:Arad_15018 nucleotidyltransferase protein.
  
     0.691
Adeg_0499
Hypothetical protein.
  
     0.664
Adeg_0842
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: afr:AFE_1365 HNH endonuclease domain protein.
  
     0.625
Adeg_0841
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pha:PSHAb0292 putative HNH endonuclease.
  
     0.579
Adeg_0154
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: afr:AFE_1328 transposase, IS605 OrfB family protein, putative.
  
     0.527
Adeg_0555
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pha:PSHAb0292 putative HNH endonuclease.
  
     0.483
Adeg_1790
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pha:PSHAb0292 putative HNH endonuclease.
  
     0.477
Adeg_1067
Hypothetical protein.
       0.445
Adeg_1068
Hypothetical protein.
       0.445
Adeg_1166
Hypothetical protein; KEGG: pna:Pnap_1321 IS605 family transposase OrfB.
  
     0.414
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.