STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_1810PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: reu:Reut_B4970 sulfate transporter/antisigma-factor antagonist STAS. (252 aa)    
Predicted Functional Partners:
Adeg_1812
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: afw:Anae109_0801 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.996
Adeg_1813
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: scl:sce3741 phosphoserine phosphatase RsbX.
 
 
 0.992
Adeg_1811
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bpy:Bphyt_5778 anti-sigma-factor antagonist.
 
 
0.983
spoIIAB
Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
 
 0.943
Adeg_1814
Diguanylate cyclase; KEGG: pca:Pcar_1174 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
 
    0.837
Adeg_2017
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: rpf:Rpic12D_3678 flagellar motor switch protein FliN.
  
   0.831
Adeg_2043
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: gme:Gmet_3111 flagellar motor switch protein FliG.
  
   0.754
Adeg_2047
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.681
Adeg_1963
PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ppd:Ppro_0724 methyl-accepting chemotaxis sensory transducer.
  
  
 0.643
Adeg_2044
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.634
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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