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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_1983PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1127 hypothetical protein. (400 aa)    
Predicted Functional Partners:
Adeg_1984
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein.
 
 0.999
Adeg_1985
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_0080 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.987
Adeg_1908
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nam:NAMH_1439 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.918
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.911
Adeg_2055
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2857 ABC transporter related.
 
 
    0.869
Adeg_0098
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dat:HRM2_47450 secretion protein, HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.862
Adeg_0045
PFAM: outer membrane efflux protein; KEGG: cvi:CV_3925 periplasmic type I secretion system.
  
 
 0.835
Adeg_0099
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dze:Dd1591_3361 secretion protein HlyD family protein.
 
  
 0.820
Adeg_0557
KEGG: sfu:Sfum_1827 ABC transporter related; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
 0.811
Adeg_0353
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP0962 putative ABC transport proteins, ATP-binding component.
 
     0.738
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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