STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Adeg_2014PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ank:AnaeK_4293 methyl-viologen-reducing hydrogenase delta subunit. (319 aa)    
Predicted Functional Partners:
Adeg_2013
PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_4162 nickel-dependent hydrogenase, large subunit.
 
 
 0.994
Adeg_0332
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_16600 NuoF.
   
 
 0.960
Adeg_1784
PFAM: methyl-viologen-reducing hydrogenase delta subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.946
Adeg_2015
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.944
Adeg_0383
PFAM: glutamate synthase alpha subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1723 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.914
Adeg_1425
PFAM: methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_1624 methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.914
Adeg_1078
PFAM: methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_1050 methyl-viologen-reducing hydrogenase, delta subunit.
  
 
 0.900
Adeg_0157
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sat:SYN_01648 NADH:ubiquinone oxidoreductase, NADH-binding subunit.
   
 
 0.898
Adeg_1231
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dde:Dde_2135 periplasmic (NiFeSe) hydrogenase, large subunit, selenocysteine-containing.
  
 
 0.747
Adeg_1787
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dde:Dde_2135 periplasmic (NiFeSe) hydrogenase, large subunit, selenocysteine-containing; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.747
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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