Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Adeg_2015PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase, delta subunit. (146 aa)    
Predicted Functional Partners:
Adeg_1333
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: dvm:DvMF_0324 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.955
Adeg_0909
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: dal:Dalk_1624 methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.944
Adeg_1001
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_1624 methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.944
Adeg_2014
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ank:AnaeK_4293 methyl-viologen-reducing hydrogenase delta subunit.
 
 0.944
Adeg_1079
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1287 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.914
Adeg_2013
PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_4162 nickel-dependent hydrogenase, large subunit.
 
  
 0.877
Adeg_1885
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_2149 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.868
Adeg_0342
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3013 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.865
Adeg_1331
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_5062 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     0.845
Adeg_1335
KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit.
 
 
 0.804
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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