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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_2015PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase, delta subunit. (146 aa)    
Predicted Functional Partners:
Adeg_1333
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: dvm:DvMF_0324 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   0.962
Adeg_0909
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: dal:Dalk_1624 methyl-viologen-reducing hydrogenase delta subunit.
 
   0.952
Adeg_1001
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_1624 methyl-viologen-reducing hydrogenase delta subunit.
 
   0.951
Adeg_2014
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ank:AnaeK_4293 methyl-viologen-reducing hydrogenase delta subunit.
 
 0.949
Adeg_1079
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1287 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   0.926
Adeg_1885
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_2149 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   0.886
Adeg_0342
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3013 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   0.883
Adeg_2013
PFAM: nickel-dependent hydrogenase large subunit; KEGG: ade:Adeh_4162 nickel-dependent hydrogenase, large subunit.
 
  
 0.878
Adeg_1331
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_5062 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     0.846
Adeg_1335
KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit.
 
 
 0.817
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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