STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_2016PFAM: O-antigen polymerase; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: dps:DPPB82 related to polysaccharide transport proteins. (769 aa)    
Predicted Functional Partners:
Adeg_1797
PFAM: protein of unknown function UPF0153; KEGG: sfr:Sfri_2546 hypothetical protein.
  
     0.741
Adeg_0754
PFAM: copper amine oxidase domain protein; KEGG: gur:Gura_2022 fibronectin, type III domain-containing protein.
  
   
 0.725
Adeg_0757
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
 
 
   0.722
Adeg_1138
Chromosome segregation ATPase-like protein; KEGG: hypothetical protein.
  
   
 0.721
Adeg_0184
Signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.719
Adeg_0786
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.705
Adeg_0044
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.698
Adeg_0501
PFAM: copper amine oxidase domain protein.
  
     0.684
Adeg_1842
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein.
  
     0.675
Adeg_0524
PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein LOC608731.
  
     0.667
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.