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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adeg_2124PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dat:HRM2_10700 keto/isovalerate ferredoxin oxidoreductase, beta subunit. (262 aa)    
Predicted Functional Partners:
Adeg_1383
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dma:DMR_07360 ketoisovalerate oxidoreductase subunit VorA.
 0.999
Adeg_2123
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dal:Dalk_2233 pyruvate ferredoxin/flavodoxin oxidoreductase.
 
 0.999
Adeg_2125
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: lip:LI0790 2-ketoisovalerate ferredoxin reductase.
 
 0.999
Adeg_1385
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: sfu:Sfum_0301 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
 
 0.998
Adeg_2122
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_0602 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.990
Adeg_1386
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: glo:Glov_2310 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.975
Adeg_0440
TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: dps:DP3116 pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.937
Adeg_1284
TIGRFAM: oxaloacetate decarboxylase alpha subunit; acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; KEGG: mmw:Mmwyl1_3925 pyruvate carboxylase subunit B.
  
 
 0.934
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.926
Adeg_2126
KEGG: dal:Dalk_2229 putative ATP/GTP-binding protein.
 
   
 0.924
Your Current Organism:
Ammonifex degensii
NCBI taxonomy Id: 429009
Other names: A. degensii KC4, Ammonifex degensii KC4, Ammonifex degensii str. KC4, Ammonifex degensii strain KC4
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