STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_30090Phenylalanine ammonia-lyase. (706 aa)    
Predicted Functional Partners:
CDL12_17712
Chorismate synthase.
  
 
 0.912
CDL12_29862
Aminotran_1_2 domain-containing protein.
   
 
 0.909
CDL12_16512
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
     
 0.909
CDL12_11626
Tyrosine aminotransferase.
   
 
 0.902
CDL12_26530
Arogenate dehydrogenase (NADP(+)).
     
 0.879
CDL12_07012
Arogenate dehydrogenase (NADP(+)).
     
 0.879
CDL12_25373
Cytochrome P450 CYP2 subfamily; Belongs to the cytochrome P450 family.
   
 
 0.877
CDL12_26085
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
     
 0.866
CDL12_22129
S-adenosylhomocysteine deaminase.
  
 
 0.858
CDL12_22128
Amidohydro-rel domain-containing protein.
  
 
 0.858
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.