STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_29385Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
CDL12_04140
Uncharacterized protein.
  
  
 
0.701
CDL12_26355
Uncharacterized protein.
  
  
 
0.699
CDL12_05314
Uncharacterized protein.
  
  
 
0.699
CDL12_16574
SNARE protein Syntaxin 1.
  
     0.488
CDL12_13388
Uncharacterized protein.
  
     0.464
CDL12_30116
AMPK1_CBM domain-containing protein.
  
     0.443
CDL12_10234
Uncharacterized protein.
  
     0.409
CDL12_23336
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.407
CDL12_27883
Protein disulfide-isomerase.
  
     0.404
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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