STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_2880240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (126 aa)    
Predicted Functional Partners:
CDL12_08850
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
CDL12_05569
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
CDL12_12783
Translation initiation factor 2, alpha subunit (eIF-2alpha).
   
 0.997
CDL12_06673
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.997
CDL12_23671
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.996
CDL12_23759
Ribosomal protein RPL1/RPL2/RL4L4.
   
 0.996
CDL12_22737
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.996
CDL12_19826
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.996
CDL12_18584
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.996
CDL12_14078
Ribosomal protein RPL1/RPL2/RL4L4.
   
 0.996
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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