STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_28300WPP domain-containing protein. (189 aa)    
Predicted Functional Partners:
CDL12_20584
Uncharacterized protein; Belongs to the NPH3 family.
  
   
 0.504
CDL12_06543
Uncharacterized protein.
  
     0.504
CDL12_07916
Uncharacterized protein.
  
     0.497
CDL12_07914
Uncharacterized protein.
  
     0.492
CDL12_04119
Uncharacterized protein.
  
     0.485
CDL12_23215
Xylogalacturonan beta-1,3-xylosyltransferase.
  
     0.484
CDL12_24558
Uncharacterized protein.
  
     0.482
CDL12_15895
Uncharacterized protein.
  
     0.482
CDL12_08203
Lzipper-MIP1 domain-containing protein.
  
     0.481
CDL12_27888
NB-ARC domain-containing protein.
  
     0.477
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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