STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_27963Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
CDL12_19357
Putative RNA-binding protein (RRM superfamily).
   
 0.939
CDL12_00636
26S proteasome regulatory complex, subunit PSMD10.
    
 0.895
CDL12_10373
BHLH domain-containing protein.
    
 0.885
CDL12_27933
BHLH domain-containing protein.
    
 0.885
CDL12_23508
BHLH domain-containing protein.
    
 0.885
CDL12_21071
BHLH domain-containing protein.
    
 0.885
CDL12_14331
BHLH domain-containing protein.
    
 0.885
CDL12_07376
BHLH domain-containing protein.
    
 0.885
CDL12_07379
BHLH domain-containing protein.
    
 0.885
CDL12_11870
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 0.846
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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