STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_27138Catechol oxidase. (580 aa)    
Predicted Functional Partners:
CDL12_30101
Sulfite oxidase, molybdopterin-binding component.
    
 0.733
CDL12_08293
NADH-cytochrome b-5 reductase.
    
 0.733
CDL12_03790
Putative cleavage and polyadenylation specificity factor (CPSF subunit).
    
 0.721
CDL12_27734
Uncharacterized protein.
    
 0.706
CDL12_01033
Uncharacterized protein.
    
 0.704
CDL12_16067
Putative cleavage and polyadenylation specificity factor (CPSF subunit).
    
 0.677
CDL12_05546
Putative cleavage and polyadenylation specificity factor (CPSF subunit).
    
 0.677
CDL12_21356
Uncharacterized protein.
    
 0.674
CDL12_11389
Uncharacterized protein.
    
 0.674
CDL12_29862
Aminotran_1_2 domain-containing protein.
   
 
  0.633
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.